Level 1
ST 8 PE 3 EN 9 CH 3 IN 3 AG 10 LK 4
Melee Weapons, Sneak, and Science
Bobblehead (Intelligence)
Level 2
Melee Weapons +14 (50)
Intense Training (LK)
Bobblehead (Strength)
Ant Might
Bobblehead (Endurance)
Bobblehead (Perception)
Bobblehead (Charisma)
Bobblehead (Luck)
Bobblehead (Barter)
Bobblehead (Big Guns)
Bobblehead (Energy Weapons)
Bobblehead (Explosives)
Bobblehead (Lockpick)
Bobblehead (Medicine)
Bobblehead (Melee Weapons)
Bobblehead (Repair)
Bobblehead (Science)
Bobblehead (Small Guns)
Bobblehead (Sneak)
Bobblehead (Speech)
Bobblehead (Unarmed)
Barkskin
Power Armor Training
Rad Regeneration
Wired Reflexes
Level 3
Melee Weapons +14 (79)
Intense Training (LK)
Level 4
Sneak +2 (53), Lockpick +1 (25), Melee Weapons +11 (90)
Educated
Level 5
Lockpick +6 (31), Science +11 (50)
Comprehension
Level 6
Lockpick +17 (48)
Bloody Mess
Level 7
Sneak +15 (68), Lockpick +2 (50)
Intense Training (LK)
Level 8
Sneak +17 (85)
Intense Training (IN)
Level 9
Sneak +5 (90), Repair +13 (39)
Intense Training (PE)
Level 10
Repair +1 (40), Medicine +17 (43)
Finesse
Level 11
Lockpick +11 (65), Medicine +7 (50)
Intense Training (PE)
Level 12
Science +8 (60), Medicine +10 (60)
Life Giver
Level 13
Lockpick +15 (80), Science +3 (63)
Silent Running
Level 14
Repair +6 (46), Science +12 (75)
Cyborg
Level 15
Repair +18 (66)
Intense Training (IN)
Level 16
Lockpick +19 (99)
Action Boy/Girl
Level 17
Lockpick +1 (100), Science +18 (95)
Better Criticals
Level 18
Repair +4 (70), Melee Weapons +10 (100), Medicine +5 (72)
Daddy's Boy/Girl
Level 19
Medicine +19 (91)
Tag! (Repair)
Level 20
Repair +10 (95), Medicine +9 (100)
Ninja
Also i can't decide if its worth having your last perk be Ninja or Grim Reaper's Spirit.
Ninja adds 15% crit and 25% more damage when sneaking.
Grim Reaper (i'll be using Fawkes' Super Sledge which has 5 hits on a full action bar [38 action points per swing]). so if you can kill someone in 5 hits you can kill the next guy too and keep going.
Grim Reaper would be really good depending on how tough guys are (what difficulty your on and how far into the game you are but i think it would be best for most situations) but for really tough guys (bosses or what have you) ninja will be better.